Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Gm10602-201ENSMUST00000098239 609 ntBASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn4rl1Q8K0S5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn4rl1Q8K0S5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.48■□□□□ 0.87
Rtn4rl1Q8K0S5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn4rl1Q8K0S5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn4rl1Q8K0S5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.48■□□□□ 0.87
Rtn4rl1Q8K0S5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn4rl1Q8K0S5 Reep4-203ENSMUST00000226563 1444 ntBASIC20.46■□□□□ 0.87
Rtn4rl1Q8K0S5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4rl1Q8K0S5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4rl1Q8K0S5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn4rl1Q8K0S5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.46■□□□□ 0.87
Rtn4rl1Q8K0S5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.46■□□□□ 0.87
Rtn4rl1Q8K0S5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn4rl1Q8K0S5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rtn4rl1Q8K0S5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4rl1Q8K0S5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4rl1Q8K0S5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4rl1Q8K0S5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn4rl1Q8K0S5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.43■□□□□ 0.86
Rtn4rl1Q8K0S5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Gm12933-201ENSMUST00000120203 872 ntBASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn4rl1Q8K0S5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn4rl1Q8K0S5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn4rl1Q8K0S5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.39■□□□□ 0.86
Rtn4rl1Q8K0S5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4rl1Q8K0S5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn4rl1Q8K0S5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rtn4rl1Q8K0S5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4rl1Q8K0S5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4rl1Q8K0S5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn4rl1Q8K0S5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Gm27801-201ENSMUST00000184174 223 ntBASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms