Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip4Q8CI96 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip4Q8CI96 Gm9847-201ENSMUST00000052528 599 ntBASIC20.07■□□□□ 0.8
Clip4Q8CI96 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Clip4Q8CI96 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip4Q8CI96 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip4Q8CI96 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip4Q8CI96 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip4Q8CI96 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip4Q8CI96 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip4Q8CI96 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip4Q8CI96 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Gm12922-201ENSMUST00000120626 809 ntBASIC20.05■□□□□ 0.8
Clip4Q8CI96 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Clip4Q8CI96 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip4Q8CI96 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip4Q8CI96 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clip4Q8CI96 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Clip4Q8CI96 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.02■□□□□ 0.8
Clip4Q8CI96 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.02■□□□□ 0.8
Clip4Q8CI96 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Gm13241-201ENSMUST00000094493 780 ntBASIC20.02■□□□□ 0.8
Clip4Q8CI96 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip4Q8CI96 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clip4Q8CI96 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Clip4Q8CI96 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clip4Q8CI96 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clip4Q8CI96 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clip4Q8CI96 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clip4Q8CI96 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.01■□□□□ 0.79
Clip4Q8CI96 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clip4Q8CI96 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip4Q8CI96 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip4Q8CI96 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clip4Q8CI96 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clip4Q8CI96 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip4Q8CI96 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clip4Q8CI96 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip4Q8CI96 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip4Q8CI96 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip4Q8CI96 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20■□□□□ 0.79
Clip4Q8CI96 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip4Q8CI96 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.98■□□□□ 0.79
Clip4Q8CI96 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip4Q8CI96 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip4Q8CI96 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Clip4Q8CI96 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 210.4 ms