Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ShfQ8CG80 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ShfQ8CG80 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.89■□□□□ 0.45
ShfQ8CG80 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.88■□□□□ 0.45
ShfQ8CG80 Gm40881-201ENSMUST00000223397 166 ntBASIC17.88■□□□□ 0.45
ShfQ8CG80 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ShfQ8CG80 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ShfQ8CG80 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ShfQ8CG80 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.87■□□□□ 0.45
ShfQ8CG80 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ShfQ8CG80 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ShfQ8CG80 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ShfQ8CG80 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.86■□□□□ 0.45
ShfQ8CG80 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ShfQ8CG80 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ShfQ8CG80 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.85■□□□□ 0.45
ShfQ8CG80 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShfQ8CG80 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ShfQ8CG80 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShfQ8CG80 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShfQ8CG80 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShfQ8CG80 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
ShfQ8CG80 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShfQ8CG80 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShfQ8CG80 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.84■□□□□ 0.45
ShfQ8CG80 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.84■□□□□ 0.45
ShfQ8CG80 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShfQ8CG80 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShfQ8CG80 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ShfQ8CG80 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShfQ8CG80 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.84■□□□□ 0.45
ShfQ8CG80 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ShfQ8CG80 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ShfQ8CG80 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ShfQ8CG80 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ShfQ8CG80 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShfQ8CG80 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ShfQ8CG80 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
ShfQ8CG80 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.83■□□□□ 0.44
ShfQ8CG80 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShfQ8CG80 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ShfQ8CG80 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShfQ8CG80 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Mir6236-201ENSMUST00000184437 123 ntBASIC17.81■□□□□ 0.44
ShfQ8CG80 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ShfQ8CG80 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.81■□□□□ 0.44
ShfQ8CG80 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShfQ8CG80 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ShfQ8CG80 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShfQ8CG80 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ShfQ8CG80 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.8■□□□□ 0.44
ShfQ8CG80 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ShfQ8CG80 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ShfQ8CG80 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShfQ8CG80 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ShfQ8CG80 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShfQ8CG80 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShfQ8CG80 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ShfQ8CG80 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms