Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC31.94■■■□□ 2.7
Pabpn1Q8CCS6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Pabpn1Q8CCS6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Pabpn1Q8CCS6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Pabpn1Q8CCS6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 AC121577.1-201ENSMUST00000227302 707 ntBASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pabpn1Q8CCS6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pabpn1Q8CCS6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC31.92■■■□□ 2.7
Pabpn1Q8CCS6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC31.92■■■□□ 2.7
Pabpn1Q8CCS6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pabpn1Q8CCS6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Gm13146-201ENSMUST00000118508 780 ntBASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pabpn1Q8CCS6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC31.9■■■□□ 2.7
Pabpn1Q8CCS6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pabpn1Q8CCS6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pabpn1Q8CCS6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pabpn1Q8CCS6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pabpn1Q8CCS6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC31.89■■■□□ 2.7
Pabpn1Q8CCS6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pabpn1Q8CCS6 Gm10819-201ENSMUST00000099988 561 ntBASIC31.89■■■□□ 2.7
Pabpn1Q8CCS6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Pabpn1Q8CCS6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
Pabpn1Q8CCS6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Pabpn1Q8CCS6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Pabpn1Q8CCS6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC31.86■■■□□ 2.69
Pabpn1Q8CCS6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Pabpn1Q8CCS6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pabpn1Q8CCS6 Gm44672-201ENSMUST00000206944 1098 ntBASIC31.85■■■□□ 2.69
Pabpn1Q8CCS6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pabpn1Q8CCS6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Pabpn1Q8CCS6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pabpn1Q8CCS6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Pabpn1Q8CCS6 Gm5643-201ENSMUST00000117081 966 ntBASIC31.84■■■□□ 2.69
Pabpn1Q8CCS6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Pabpn1Q8CCS6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pabpn1Q8CCS6 Gm6420-201ENSMUST00000193885 723 ntBASIC31.83■■■□□ 2.69
Pabpn1Q8CCS6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pabpn1Q8CCS6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pabpn1Q8CCS6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pabpn1Q8CCS6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
Pabpn1Q8CCS6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.69
Pabpn1Q8CCS6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
Pabpn1Q8CCS6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Pabpn1Q8CCS6 Gm9987-201ENSMUST00000069768 567 ntBASIC31.82■■■□□ 2.68
Pabpn1Q8CCS6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
Pabpn1Q8CCS6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pabpn1Q8CCS6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC31.81■■■□□ 2.68
Pabpn1Q8CCS6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
Pabpn1Q8CCS6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pabpn1Q8CCS6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pabpn1Q8CCS6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC31.8■■■□□ 2.68
Pabpn1Q8CCS6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
Pabpn1Q8CCS6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Pabpn1Q8CCS6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC31.8■■■□□ 2.68
Pabpn1Q8CCS6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Pabpn1Q8CCS6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pabpn1Q8CCS6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pabpn1Q8CCS6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pabpn1Q8CCS6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pabpn1Q8CCS6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pabpn1Q8CCS6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Pabpn1Q8CCS6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
Pabpn1Q8CCS6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC31.78■■■□□ 2.68
Pabpn1Q8CCS6 Gm27275-201ENSMUST00000184318 272 ntBASIC31.78■■■□□ 2.68
Pabpn1Q8CCS6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Pabpn1Q8CCS6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pabpn1Q8CCS6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pabpn1Q8CCS6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC31.77■■■□□ 2.68
Pabpn1Q8CCS6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Pabpn1Q8CCS6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Pabpn1Q8CCS6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Pabpn1Q8CCS6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pabpn1Q8CCS6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Gm26524-201ENSMUST00000192339 390 ntBASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pabpn1Q8CCS6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms