Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Gm15039-201ENSMUST00000118914 875 ntBASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx6Q8C7R7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx6Q8C7R7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx6Q8C7R7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx6Q8C7R7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.31■□□□□ 0.84
Rfx6Q8C7R7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx6Q8C7R7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx6Q8C7R7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rfx6Q8C7R7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx6Q8C7R7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.28■□□□□ 0.84
Rfx6Q8C7R7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx6Q8C7R7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx6Q8C7R7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rfx6Q8C7R7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.27■□□□□ 0.83
Rfx6Q8C7R7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.26■□□□□ 0.83
Rfx6Q8C7R7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx6Q8C7R7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx6Q8C7R7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx6Q8C7R7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx6Q8C7R7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx6Q8C7R7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx6Q8C7R7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.24■□□□□ 0.83
Rfx6Q8C7R7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx6Q8C7R7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx6Q8C7R7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx6Q8C7R7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx6Q8C7R7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx6Q8C7R7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx6Q8C7R7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rfx6Q8C7R7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms