Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.59■■□□□ 1.37
Usp44Q8C2S0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Usp44Q8C2S0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.58■■□□□ 1.36
Usp44Q8C2S0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp44Q8C2S0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.56■■□□□ 1.36
Usp44Q8C2S0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp44Q8C2S0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp44Q8C2S0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp44Q8C2S0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp44Q8C2S0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp44Q8C2S0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp44Q8C2S0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp44Q8C2S0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp44Q8C2S0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp44Q8C2S0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Usp44Q8C2S0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Usp44Q8C2S0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp44Q8C2S0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp44Q8C2S0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Usp44Q8C2S0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp44Q8C2S0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms