Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tsen54Q8C2A2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tsen54Q8C2A2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tsen54Q8C2A2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tsen54Q8C2A2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tsen54Q8C2A2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tsen54Q8C2A2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tsen54Q8C2A2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tsen54Q8C2A2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms