Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ska3Q8C263 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ska3Q8C263 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ska3Q8C263 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.8■□□□□ 0.6
Ska3Q8C263 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ska3Q8C263 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ska3Q8C263 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ska3Q8C263 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ska3Q8C263 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.79■□□□□ 0.6
Ska3Q8C263 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.79■□□□□ 0.6
Ska3Q8C263 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ska3Q8C263 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ska3Q8C263 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ska3Q8C263 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ska3Q8C263 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ska3Q8C263 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ska3Q8C263 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ska3Q8C263 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ska3Q8C263 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ska3Q8C263 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ska3Q8C263 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ska3Q8C263 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ska3Q8C263 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ska3Q8C263 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ska3Q8C263 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ska3Q8C263 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ska3Q8C263 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ska3Q8C263 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ska3Q8C263 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ska3Q8C263 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ska3Q8C263 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ska3Q8C263 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ska3Q8C263 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Gm21956-201ENSMUST00000179946 522 ntBASIC18.76■□□□□ 0.59
Ska3Q8C263 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.76■□□□□ 0.59
Ska3Q8C263 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.76■□□□□ 0.59
Ska3Q8C263 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ska3Q8C263 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ska3Q8C263 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ska3Q8C263 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.74■□□□□ 0.59
Ska3Q8C263 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ska3Q8C263 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.74■□□□□ 0.59
Ska3Q8C263 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ska3Q8C263 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ska3Q8C263 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ska3Q8C263 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Mir6236-201ENSMUST00000184437 123 ntBASIC18.73■□□□□ 0.59
Ska3Q8C263 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.73■□□□□ 0.59
Ska3Q8C263 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.73■□□□□ 0.59
Ska3Q8C263 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ska3Q8C263 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ska3Q8C263 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ska3Q8C263 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.72■□□□□ 0.59
Ska3Q8C263 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ska3Q8C263 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ska3Q8C263 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.71■□□□□ 0.59
Ska3Q8C263 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.71■□□□□ 0.59
Ska3Q8C263 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ska3Q8C263 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms