Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Gm10232-201ENSMUST00000089221 720 ntBASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps9d1Q8C190 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps9d1Q8C190 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Rps24-207ENSMUST00000224568 714 ntBASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps9d1Q8C190 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps9d1Q8C190 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps9d1Q8C190 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vps9d1Q8C190 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps9d1Q8C190 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps9d1Q8C190 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps9d1Q8C190 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps9d1Q8C190 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps9d1Q8C190 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps9d1Q8C190 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps9d1Q8C190 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps9d1Q8C190 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps9d1Q8C190 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Vps9d1Q8C190 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps9d1Q8C190 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps9d1Q8C190 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Vps9d1Q8C190 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
Vps9d1Q8C190 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps9d1Q8C190 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps9d1Q8C190 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps9d1Q8C190 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.6■□□□□ 0.57
Vps9d1Q8C190 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.6■□□□□ 0.57
Vps9d1Q8C190 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps9d1Q8C190 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps9d1Q8C190 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps9d1Q8C190 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps9d1Q8C190 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps9d1Q8C190 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps9d1Q8C190 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps9d1Q8C190 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps9d1Q8C190 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps9d1Q8C190 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms