Protein–RNA interactions for Protein: Q8C0S0

4932411N23Rik, RIKEN cDNA 4932411N23, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4932411N23RikQ8C0S0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
4932411N23RikQ8C0S0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
4932411N23RikQ8C0S0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
4932411N23RikQ8C0S0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
4932411N23RikQ8C0S0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
4932411N23RikQ8C0S0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
4932411N23RikQ8C0S0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
4932411N23RikQ8C0S0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
4932411N23RikQ8C0S0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
4932411N23RikQ8C0S0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
4932411N23RikQ8C0S0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Gm43530-201ENSMUST00000195920 274 ntBASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
4932411N23RikQ8C0S0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
4932411N23RikQ8C0S0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
4932411N23RikQ8C0S0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
4932411N23RikQ8C0S0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
4932411N23RikQ8C0S0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
4932411N23RikQ8C0S0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20■□□□□ 0.79
4932411N23RikQ8C0S0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20■□□□□ 0.79
4932411N23RikQ8C0S0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
4932411N23RikQ8C0S0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
4932411N23RikQ8C0S0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
4932411N23RikQ8C0S0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
4932411N23RikQ8C0S0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
4932411N23RikQ8C0S0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
4932411N23RikQ8C0S0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
4932411N23RikQ8C0S0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
4932411N23RikQ8C0S0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
4932411N23RikQ8C0S0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
4932411N23RikQ8C0S0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
4932411N23RikQ8C0S0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms