Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trub1Q8C0D0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trub1Q8C0D0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trub1Q8C0D0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Mir6236-201ENSMUST00000184437 123 ntBASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trub1Q8C0D0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Trub1Q8C0D0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trub1Q8C0D0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trub1Q8C0D0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trub1Q8C0D0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trub1Q8C0D0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trub1Q8C0D0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trub1Q8C0D0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trub1Q8C0D0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trub1Q8C0D0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trub1Q8C0D0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trub1Q8C0D0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trub1Q8C0D0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trub1Q8C0D0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trub1Q8C0D0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trub1Q8C0D0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trub1Q8C0D0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trub1Q8C0D0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trub1Q8C0D0 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms