Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Rsph4aQ8BYM7 Gm22240-201ENSMUST00000175225 82 ntBASIC28.9■■■□□ 2.22
Rsph4aQ8BYM7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Rsph4aQ8BYM7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rsph4aQ8BYM7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC28.89■■■□□ 2.22
Rsph4aQ8BYM7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
Rsph4aQ8BYM7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rsph4aQ8BYM7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Rsph4aQ8BYM7 Gm8520-201ENSMUST00000186517 868 ntBASIC28.88■■■□□ 2.21
Rsph4aQ8BYM7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC28.88■■■□□ 2.21
Rsph4aQ8BYM7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC28.88■■■□□ 2.21
Rsph4aQ8BYM7 Gm43403-201ENSMUST00000198011 1786 ntBASIC28.88■■■□□ 2.21
Rsph4aQ8BYM7 Gm7290-201ENSMUST00000104990 617 ntBASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Gm12918-201ENSMUST00000120234 636 ntBASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Gm15710-201ENSMUST00000121821 636 ntBASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Gm5075-201ENSMUST00000196916 622 ntBASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rsph4aQ8BYM7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rsph4aQ8BYM7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Rsph4aQ8BYM7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
Rsph4aQ8BYM7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC28.85■■■□□ 2.21
Rsph4aQ8BYM7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
Rsph4aQ8BYM7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Rsph4aQ8BYM7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Rsph4aQ8BYM7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Rsph4aQ8BYM7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Rsph4aQ8BYM7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC28.84■■■□□ 2.21
Rsph4aQ8BYM7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC28.84■■■□□ 2.21
Rsph4aQ8BYM7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rsph4aQ8BYM7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
Rsph4aQ8BYM7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rsph4aQ8BYM7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rsph4aQ8BYM7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rsph4aQ8BYM7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Rsph4aQ8BYM7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rsph4aQ8BYM7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rsph4aQ8BYM7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rsph4aQ8BYM7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rsph4aQ8BYM7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rsph4aQ8BYM7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC28.81■■■□□ 2.2
Rsph4aQ8BYM7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC28.8■■■□□ 2.2
Rsph4aQ8BYM7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rsph4aQ8BYM7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Rsph4aQ8BYM7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rsph4aQ8BYM7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rsph4aQ8BYM7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rsph4aQ8BYM7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC28.79■■■□□ 2.2
Rsph4aQ8BYM7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rsph4aQ8BYM7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rsph4aQ8BYM7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rsph4aQ8BYM7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rsph4aQ8BYM7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC28.77■■■□□ 2.2
Rsph4aQ8BYM7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Rsph4aQ8BYM7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Gm12527-201ENSMUST00000117967 564 ntBASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Gm13146-201ENSMUST00000118508 780 ntBASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Rsph4aQ8BYM7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Rsph4aQ8BYM7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rsph4aQ8BYM7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rsph4aQ8BYM7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Rsph4aQ8BYM7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC28.74■■■□□ 2.19
Rsph4aQ8BYM7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC28.74■■■□□ 2.19
Rsph4aQ8BYM7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rsph4aQ8BYM7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rsph4aQ8BYM7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Rsph4aQ8BYM7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC28.73■■■□□ 2.19
Rsph4aQ8BYM7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC28.73■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms