Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrtm1Q8BXQ3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrtm1Q8BXQ3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lrtm1Q8BXQ3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Lrtm1Q8BXQ3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lrtm1Q8BXQ3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Gm27454-201ENSMUST00000185090 204 ntBASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lrtm1Q8BXQ3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lrtm1Q8BXQ3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Gm43137-201ENSMUST00000198052 594 ntBASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms