Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trerf1Q8BXJ2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Trerf1Q8BXJ2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.86■□□□□ 0.93
Trerf1Q8BXJ2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Gm12922-201ENSMUST00000120626 809 ntBASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trerf1Q8BXJ2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trerf1Q8BXJ2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Gm13241-201ENSMUST00000094493 780 ntBASIC20.83■□□□□ 0.93
Trerf1Q8BXJ2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trerf1Q8BXJ2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trerf1Q8BXJ2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trerf1Q8BXJ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Trerf1Q8BXJ2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trerf1Q8BXJ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trerf1Q8BXJ2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trerf1Q8BXJ2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Trerf1Q8BXJ2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.78■□□□□ 0.92
Trerf1Q8BXJ2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.77■□□□□ 0.92
Trerf1Q8BXJ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Trerf1Q8BXJ2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.77■□□□□ 0.92
Trerf1Q8BXJ2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trerf1Q8BXJ2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms