Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sfr1Q8BP27 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sfr1Q8BP27 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sfr1Q8BP27 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sfr1Q8BP27 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sfr1Q8BP27 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sfr1Q8BP27 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sfr1Q8BP27 Gm12821-201ENSMUST00000120022 600 ntBASIC20.26■□□□□ 0.83
Sfr1Q8BP27 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Sfr1Q8BP27 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sfr1Q8BP27 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sfr1Q8BP27 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.24■□□□□ 0.83
Sfr1Q8BP27 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sfr1Q8BP27 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Mir6236-201ENSMUST00000184437 123 ntBASIC20.22■□□□□ 0.83
Sfr1Q8BP27 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sfr1Q8BP27 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sfr1Q8BP27 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sfr1Q8BP27 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Sfr1Q8BP27 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sfr1Q8BP27 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sfr1Q8BP27 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sfr1Q8BP27 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sfr1Q8BP27 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sfr1Q8BP27 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.18■□□□□ 0.82
Sfr1Q8BP27 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sfr1Q8BP27 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sfr1Q8BP27 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sfr1Q8BP27 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms