Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Mir6236-201ENSMUST00000184437 123 ntBASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpne4Q8BLR2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpne4Q8BLR2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpne4Q8BLR2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Gm43137-201ENSMUST00000198052 594 ntBASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpne4Q8BLR2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpne4Q8BLR2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
Cpne4Q8BLR2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.84■□□□□ 0.45
Cpne4Q8BLR2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Cpne4Q8BLR2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne4Q8BLR2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne4Q8BLR2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpne4Q8BLR2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cpne4Q8BLR2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.83■□□□□ 0.45
Cpne4Q8BLR2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpne4Q8BLR2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cpne4Q8BLR2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne4Q8BLR2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne4Q8BLR2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms