Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Gm5812-201ENSMUST00000061073 957 ntBASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rnf38Q8BI21 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf38Q8BI21 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf38Q8BI21 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf38Q8BI21 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf38Q8BI21 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.29■□□□□ 0.68
Rnf38Q8BI21 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rnf38Q8BI21 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.29■□□□□ 0.68
Rnf38Q8BI21 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf38Q8BI21 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf38Q8BI21 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf38Q8BI21 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rnf38Q8BI21 Gm10399-202ENSMUST00000202768 748 ntBASIC19.27■□□□□ 0.68
Rnf38Q8BI21 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.27■□□□□ 0.68
Rnf38Q8BI21 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rnf38Q8BI21 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.27■□□□□ 0.67
Rnf38Q8BI21 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Gm10232-201ENSMUST00000089221 720 ntBASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rnf38Q8BI21 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rnf38Q8BI21 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf38Q8BI21 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf38Q8BI21 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Gm15546-201ENSMUST00000122095 826 ntBASIC19.22■□□□□ 0.67
Rnf38Q8BI21 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf38Q8BI21 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms