Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smndc1Q8BGT7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smndc1Q8BGT7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smndc1Q8BGT7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smndc1Q8BGT7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.18■□□□□ 0.66
Smndc1Q8BGT7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smndc1Q8BGT7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smndc1Q8BGT7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.18■□□□□ 0.66
Smndc1Q8BGT7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Smndc1Q8BGT7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.18■□□□□ 0.66
Smndc1Q8BGT7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smndc1Q8BGT7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Smndc1Q8BGT7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smndc1Q8BGT7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms