Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.49■□□□□ 0.71
Trim50Q810I2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Trim50Q810I2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim50Q810I2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.49■□□□□ 0.71
Trim50Q810I2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim50Q810I2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim50Q810I2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim50Q810I2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.48■□□□□ 0.71
Trim50Q810I2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.48■□□□□ 0.71
Trim50Q810I2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim50Q810I2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim50Q810I2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim50Q810I2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim50Q810I2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim50Q810I2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim50Q810I2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trim50Q810I2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim50Q810I2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.46■□□□□ 0.71
Trim50Q810I2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim50Q810I2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Trim50Q810I2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim50Q810I2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim50Q810I2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.45■□□□□ 0.7
Trim50Q810I2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim50Q810I2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim50Q810I2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.44■□□□□ 0.7
Trim50Q810I2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim50Q810I2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim50Q810I2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim50Q810I2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim50Q810I2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim50Q810I2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim50Q810I2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim50Q810I2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trim50Q810I2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim50Q810I2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim50Q810I2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim50Q810I2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim50Q810I2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trim50Q810I2 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.4■□□□□ 0.7
Trim50Q810I2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim50Q810I2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Trim50Q810I2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim50Q810I2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim50Q810I2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Trim50Q810I2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim50Q810I2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms