Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Kcmf1Q80UY2 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.85■□□□□ 0.61
Kcmf1Q80UY2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.85■□□□□ 0.61
Kcmf1Q80UY2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Kcmf1Q80UY2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Kcmf1Q80UY2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Kcmf1Q80UY2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Kcmf1Q80UY2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Kcmf1Q80UY2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Kcmf1Q80UY2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Kcmf1Q80UY2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.83■□□□□ 0.6
Kcmf1Q80UY2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.83■□□□□ 0.6
Kcmf1Q80UY2 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.83■□□□□ 0.6
Kcmf1Q80UY2 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.83■□□□□ 0.6
Kcmf1Q80UY2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Kcmf1Q80UY2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Kcmf1Q80UY2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Kcmf1Q80UY2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Kcmf1Q80UY2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Kcmf1Q80UY2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Kcmf1Q80UY2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Kcmf1Q80UY2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcmf1Q80UY2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Kcmf1Q80UY2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcmf1Q80UY2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Kcmf1Q80UY2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Kcmf1Q80UY2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Kcmf1Q80UY2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms