Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh19Q80TF3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh19Q80TF3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh19Q80TF3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdh19Q80TF3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh19Q80TF3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh19Q80TF3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh19Q80TF3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh19Q80TF3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh19Q80TF3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh19Q80TF3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.58■□□□□ 0.73
Pcdh19Q80TF3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh19Q80TF3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh19Q80TF3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh19Q80TF3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms