Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf38bQ80SY5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Prpf38bQ80SY5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Gm18671-201ENSMUST00000214826 683 ntBASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Gm10602-201ENSMUST00000098239 609 ntBASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Prpf38bQ80SY5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Prpf38bQ80SY5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf38bQ80SY5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf38bQ80SY5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf38bQ80SY5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf38bQ80SY5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf38bQ80SY5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf38bQ80SY5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Prpf38bQ80SY5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Prpf38bQ80SY5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf38bQ80SY5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Gm12933-201ENSMUST00000120203 872 ntBASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf38bQ80SY5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Gm12251-201ENSMUST00000117893 792 ntBASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 AV356131-201ENSMUST00000206201 750 ntBASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf38bQ80SY5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Prpf38bQ80SY5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Prpf38bQ80SY5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms