Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3d21Q7TSG5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3d21Q7TSG5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3d21Q7TSG5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3d21Q7TSG5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3d21Q7TSG5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.85■■□□□ 1.09
Sh3d21Q7TSG5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sh3d21Q7TSG5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3d21Q7TSG5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Sh3d21Q7TSG5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3d21Q7TSG5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3d21Q7TSG5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3d21Q7TSG5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Golgb1-201ENSMUST00000023534 498 ntBASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.79■■□□□ 1.08
Sh3d21Q7TSG5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Gm12922-201ENSMUST00000120626 809 ntBASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3d21Q7TSG5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3d21Q7TSG5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Sh3d21Q7TSG5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms