Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Smad6-203ENSMUST00000179458 273 ntBASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubfd1Q78JW9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.54■□□□□ 0.72
Ubfd1Q78JW9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubfd1Q78JW9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Ubfd1Q78JW9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ubfd1Q78JW9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubfd1Q78JW9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ubfd1Q78JW9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubfd1Q78JW9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubfd1Q78JW9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubfd1Q78JW9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubfd1Q78JW9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ubfd1Q78JW9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubfd1Q78JW9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubfd1Q78JW9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubfd1Q78JW9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubfd1Q78JW9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubfd1Q78JW9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms