Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.15■■□□□ 1.46
Npc1l1Q6T3U4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Npc1l1Q6T3U4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Npc1l1Q6T3U4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Npc1l1Q6T3U4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Npc1l1Q6T3U4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Npc1l1Q6T3U4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Npc1l1Q6T3U4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Mir6236-201ENSMUST00000184437 123 ntBASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Npc1l1Q6T3U4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.12■■□□□ 1.45
Npc1l1Q6T3U4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
Npc1l1Q6T3U4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Npc1l1Q6T3U4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Npc1l1Q6T3U4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Npc1l1Q6T3U4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.08■■□□□ 1.45
Npc1l1Q6T3U4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Npc1l1Q6T3U4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Npc1l1Q6T3U4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Npc1l1Q6T3U4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Gm10209-201ENSMUST00000203397 1607 ntBASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Npc1l1Q6T3U4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.06■■□□□ 1.44
Npc1l1Q6T3U4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 Gm26833-201ENSMUST00000180899 440 ntBASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Npc1l1Q6T3U4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms