Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx58Q6Q899 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.94■■□□□ 1.58
Ddx58Q6Q899 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx58Q6Q899 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx58Q6Q899 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx58Q6Q899 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx58Q6Q899 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx58Q6Q899 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx58Q6Q899 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx58Q6Q899 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx58Q6Q899 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx58Q6Q899 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx58Q6Q899 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx58Q6Q899 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx58Q6Q899 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx58Q6Q899 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC24.91■■□□□ 1.58
Ddx58Q6Q899 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx58Q6Q899 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx58Q6Q899 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
Ddx58Q6Q899 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx58Q6Q899 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx58Q6Q899 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.9■■□□□ 1.58
Ddx58Q6Q899 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx58Q6Q899 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx58Q6Q899 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Ddx58Q6Q899 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx58Q6Q899 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx58Q6Q899 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx58Q6Q899 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx58Q6Q899 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
Ddx58Q6Q899 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx58Q6Q899 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx58Q6Q899 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx58Q6Q899 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx58Q6Q899 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Ddx58Q6Q899 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx58Q6Q899 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Ddx58Q6Q899 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Ddx58Q6Q899 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx58Q6Q899 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Gm5874-201ENSMUST00000096101 508 ntBASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx58Q6Q899 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx58Q6Q899 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx58Q6Q899 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Ddx58Q6Q899 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx58Q6Q899 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx58Q6Q899 Gm11421-201ENSMUST00000122124 294 ntBASIC24.84■■□□□ 1.57
Ddx58Q6Q899 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx58Q6Q899 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx58Q6Q899 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Ddx58Q6Q899 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx58Q6Q899 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx58Q6Q899 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx58Q6Q899 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx58Q6Q899 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.83■■□□□ 1.56
Ddx58Q6Q899 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx58Q6Q899 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx58Q6Q899 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx58Q6Q899 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.82■■□□□ 1.56
Ddx58Q6Q899 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx58Q6Q899 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
Ddx58Q6Q899 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Gm10493-201ENSMUST00000097270 612 ntBASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx58Q6Q899 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx58Q6Q899 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx58Q6Q899 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx58Q6Q899 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx58Q6Q899 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx58Q6Q899 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx58Q6Q899 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.8■■□□□ 1.56
Ddx58Q6Q899 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Ddx58Q6Q899 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.79■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms