Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Abcf1Q6P542 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.36■■□□□ 1.17
Abcf1Q6P542 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Abcf1Q6P542 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abcf1Q6P542 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Abcf1Q6P542 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abcf1Q6P542 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Abcf1Q6P542 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Abcf1Q6P542 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Gm10399-202ENSMUST00000202768 748 ntBASIC22.32■■□□□ 1.16
Abcf1Q6P542 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.32■■□□□ 1.16
Abcf1Q6P542 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Abcf1Q6P542 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Abcf1Q6P542 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Abcf1Q6P542 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.31■■□□□ 1.16
Abcf1Q6P542 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Abcf1Q6P542 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.31■■□□□ 1.16
Abcf1Q6P542 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Abcf1Q6P542 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Gm7417-201ENSMUST00000192950 473 ntBASIC22.3■■□□□ 1.16
Abcf1Q6P542 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Abcf1Q6P542 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Abcf1Q6P542 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Abcf1Q6P542 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abcf1Q6P542 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abcf1Q6P542 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.29■■□□□ 1.16
Abcf1Q6P542 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.29■■□□□ 1.16
Abcf1Q6P542 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abcf1Q6P542 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abcf1Q6P542 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abcf1Q6P542 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.29■■□□□ 1.16
Abcf1Q6P542 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.28■■□□□ 1.16
Abcf1Q6P542 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Abcf1Q6P542 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Abcf1Q6P542 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Abcf1Q6P542 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Abcf1Q6P542 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Abcf1Q6P542 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Abcf1Q6P542 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.26■■□□□ 1.15
Abcf1Q6P542 Gm40881-201ENSMUST00000223397 166 ntBASIC22.26■■□□□ 1.15
Abcf1Q6P542 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Abcf1Q6P542 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abcf1Q6P542 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Abcf1Q6P542 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Abcf1Q6P542 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Abcf1Q6P542 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Abcf1Q6P542 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Abcf1Q6P542 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abcf1Q6P542 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms