Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt42Q6IFX2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt42Q6IFX2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt42Q6IFX2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt42Q6IFX2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Krt42Q6IFX2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt42Q6IFX2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt42Q6IFX2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt42Q6IFX2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Gm27502-201ENSMUST00000183495 199 ntBASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Krt42Q6IFX2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt42Q6IFX2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt42Q6IFX2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt42Q6IFX2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Krt42Q6IFX2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt42Q6IFX2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Krt42Q6IFX2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Krt42Q6IFX2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt42Q6IFX2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms