Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SpenQ62504 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpenQ62504 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SpenQ62504 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpenQ62504 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.12■□□□□ 0.49
SpenQ62504 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpenQ62504 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SpenQ62504 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SpenQ62504 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SpenQ62504 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.11■□□□□ 0.49
SpenQ62504 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SpenQ62504 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.11■□□□□ 0.49
SpenQ62504 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SpenQ62504 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SpenQ62504 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpenQ62504 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpenQ62504 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SpenQ62504 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.1■□□□□ 0.49
SpenQ62504 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpenQ62504 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SpenQ62504 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpenQ62504 Gm13234-201ENSMUST00000120010 747 ntBASIC18.1■□□□□ 0.49
SpenQ62504 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SpenQ62504 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SpenQ62504 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.09■□□□□ 0.49
SpenQ62504 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SpenQ62504 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SpenQ62504 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SpenQ62504 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SpenQ62504 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SpenQ62504 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SpenQ62504 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
SpenQ62504 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.08■□□□□ 0.49
SpenQ62504 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SpenQ62504 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpenQ62504 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SpenQ62504 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpenQ62504 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.08■□□□□ 0.48
SpenQ62504 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SpenQ62504 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Gm12441-201ENSMUST00000121806 588 ntBASIC18.07■□□□□ 0.48
SpenQ62504 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.07■□□□□ 0.48
SpenQ62504 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Gm13168-201ENSMUST00000121771 632 ntBASIC18.07■□□□□ 0.48
SpenQ62504 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SpenQ62504 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.06■□□□□ 0.48
SpenQ62504 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SpenQ62504 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SpenQ62504 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.06■□□□□ 0.48
SpenQ62504 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SpenQ62504 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SpenQ62504 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SpenQ62504 Gm7514-201ENSMUST00000209475 934 ntBASIC18.05■□□□□ 0.48
SpenQ62504 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SpenQ62504 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SpenQ62504 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.05■□□□□ 0.48
SpenQ62504 Mir5133-201ENSMUST00000174955 77 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms