Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.13■□□□□ 0.33
Sptbn1Q62261 Mir5133-201ENSMUST00000174955 77 ntBASIC17.13■□□□□ 0.33
Sptbn1Q62261 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.12■□□□□ 0.33
Sptbn1Q62261 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sptbn1Q62261 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
Sptbn1Q62261 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.11■□□□□ 0.33
Sptbn1Q62261 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn1Q62261 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sptbn1Q62261 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn1Q62261 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn1Q62261 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sptbn1Q62261 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.1■□□□□ 0.33
Sptbn1Q62261 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sptbn1Q62261 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.09■□□□□ 0.33
Sptbn1Q62261 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.09■□□□□ 0.33
Sptbn1Q62261 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sptbn1Q62261 Mir6982-201ENSMUST00000184354 68 ntBASIC17.08■□□□□ 0.33
Sptbn1Q62261 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Sptbn1Q62261 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sptbn1Q62261 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sptbn1Q62261 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sptbn1Q62261 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.07■□□□□ 0.32
Sptbn1Q62261 Gm7514-201ENSMUST00000209475 934 ntBASIC17.07■□□□□ 0.32
Sptbn1Q62261 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.07■□□□□ 0.32
Sptbn1Q62261 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn1Q62261 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sptbn1Q62261 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn1Q62261 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn1Q62261 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.04■□□□□ 0.32
Sptbn1Q62261 Gm9988-201ENSMUST00000069786 435 ntBASIC17.04■□□□□ 0.32
Sptbn1Q62261 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.04■□□□□ 0.32
Sptbn1Q62261 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn1Q62261 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms