Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa2Q62193 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa2Q62193 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Gm21956-201ENSMUST00000179946 522 ntBASIC18.33■□□□□ 0.52
Rpa2Q62193 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.33■□□□□ 0.52
Rpa2Q62193 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rpa2Q62193 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa2Q62193 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpa2Q62193 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.32■□□□□ 0.52
Rpa2Q62193 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.32■□□□□ 0.52
Rpa2Q62193 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpa2Q62193 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rpa2Q62193 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rpa2Q62193 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa2Q62193 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa2Q62193 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa2Q62193 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa2Q62193 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa2Q62193 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.31■□□□□ 0.52
Rpa2Q62193 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.31■□□□□ 0.52
Rpa2Q62193 Gm13241-201ENSMUST00000094493 780 ntBASIC18.31■□□□□ 0.52
Rpa2Q62193 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa2Q62193 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Rpa2Q62193 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa2Q62193 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rpa2Q62193 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rpa2Q62193 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.3■□□□□ 0.52
Rpa2Q62193 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rpa2Q62193 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.3■□□□□ 0.52
Rpa2Q62193 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa2Q62193 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rpa2Q62193 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.29■□□□□ 0.52
Rpa2Q62193 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpa2Q62193 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rpa2Q62193 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.28■□□□□ 0.52
Rpa2Q62193 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rpa2Q62193 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.28■□□□□ 0.52
Rpa2Q62193 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.28■□□□□ 0.52
Rpa2Q62193 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpa2Q62193 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.27■□□□□ 0.52
Rpa2Q62193 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpa2Q62193 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpa2Q62193 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpa2Q62193 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rpa2Q62193 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpa2Q62193 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa2Q62193 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rpa2Q62193 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa2Q62193 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpa2Q62193 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms