Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.06■□□□□ 0.96
Trim21Q62191 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim21Q62191 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim21Q62191 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim21Q62191 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim21Q62191 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim21Q62191 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim21Q62191 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim21Q62191 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.05■□□□□ 0.96
Trim21Q62191 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim21Q62191 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim21Q62191 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Trim21Q62191 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim21Q62191 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim21Q62191 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim21Q62191 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim21Q62191 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim21Q62191 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim21Q62191 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim21Q62191 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.04■□□□□ 0.96
Trim21Q62191 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim21Q62191 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Trim21Q62191 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim21Q62191 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trim21Q62191 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.03■□□□□ 0.96
Trim21Q62191 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim21Q62191 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim21Q62191 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim21Q62191 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim21Q62191 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim21Q62191 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim21Q62191 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim21Q62191 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
Trim21Q62191 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim21Q62191 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim21Q62191 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim21Q62191 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim21Q62191 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Trim21Q62191 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim21Q62191 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Trim21Q62191 Gm5812-201ENSMUST00000061073 957 ntBASIC21.01■□□□□ 0.95
Trim21Q62191 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.01■□□□□ 0.95
Trim21Q62191 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim21Q62191 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim21Q62191 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim21Q62191 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim21Q62191 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim21Q62191 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim21Q62191 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim21Q62191 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Trim21Q62191 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim21Q62191 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim21Q62191 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim21Q62191 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim21Q62191 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim21Q62191 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim21Q62191 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim21Q62191 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim21Q62191 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim21Q62191 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim21Q62191 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Gm15546-201ENSMUST00000122095 826 ntBASIC20.97■□□□□ 0.95
Trim21Q62191 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Gm7417-201ENSMUST00000192950 473 ntBASIC20.97■□□□□ 0.95
Trim21Q62191 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim21Q62191 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim21Q62191 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms