Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
Notch3Q61982 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Notch3Q61982 Gm43530-201ENSMUST00000195920 274 ntBASIC15.23■□□□□ 0.03
Notch3Q61982 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Gm27011-201ENSMUST00000182352 972 ntBASIC15.23■□□□□ 0.03
Notch3Q61982 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Notch3Q61982 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Notch3Q61982 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.22■□□□□ 0.03
Notch3Q61982 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.22■□□□□ 0.03
Notch3Q61982 Gm37179-201ENSMUST00000194862 823 ntBASIC15.22■□□□□ 0.03
Notch3Q61982 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Notch3Q61982 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Notch3Q61982 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.22■□□□□ 0.03
Notch3Q61982 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.22■□□□□ 0.03
Notch3Q61982 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Notch3Q61982 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Notch3Q61982 Gm43060-201ENSMUST00000200621 289 ntBASIC15.21■□□□□ 0.03
Notch3Q61982 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Notch3Q61982 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.21■□□□□ 0.02
Notch3Q61982 Gm10033-202ENSMUST00000211874 928 ntBASIC15.21■□□□□ 0.02
Notch3Q61982 Gm40848-201ENSMUST00000221998 324 ntBASIC15.21■□□□□ 0.02
Notch3Q61982 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Notch3Q61982 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.21■□□□□ 0.02
Notch3Q61982 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Notch3Q61982 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Notch3Q61982 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.2■□□□□ 0.02
Notch3Q61982 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Notch3Q61982 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Notch3Q61982 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.2■□□□□ 0.02
Notch3Q61982 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Notch3Q61982 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Notch3Q61982 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.2■□□□□ 0.02
Notch3Q61982 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Notch3Q61982 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Notch3Q61982 Smad6-203ENSMUST00000179458 273 ntBASIC15.2■□□□□ 0.02
Notch3Q61982 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.2■□□□□ 0.02
Notch3Q61982 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Notch3Q61982 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Notch3Q61982 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.19■□□□□ 0.02
Notch3Q61982 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Notch3Q61982 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Notch3Q61982 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Notch3Q61982 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.18■□□□□ 0.02
Notch3Q61982 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.18■□□□□ 0.02
Notch3Q61982 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.18■□□□□ 0.02
Notch3Q61982 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Gm42569-201ENSMUST00000200539 472 ntBASIC15.18■□□□□ 0.02
Notch3Q61982 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Notch3Q61982 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.17■□□□□ 0.02
Notch3Q61982 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Notch3Q61982 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Notch3Q61982 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Notch3Q61982 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Notch3Q61982 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Notch3Q61982 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.17■□□□□ 0.02
Notch3Q61982 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.17■□□□□ 0.02
Notch3Q61982 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.17■□□□□ 0.02
Notch3Q61982 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms