Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd47Q61735 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd47Q61735 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd47Q61735 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd47Q61735 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.15■□□□□ 0.5
Cd47Q61735 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd47Q61735 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cd47Q61735 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd47Q61735 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd47Q61735 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd47Q61735 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd47Q61735 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd47Q61735 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.14■□□□□ 0.49
Cd47Q61735 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd47Q61735 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd47Q61735 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd47Q61735 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd47Q61735 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cd47Q61735 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.13■□□□□ 0.49
Cd47Q61735 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd47Q61735 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.12■□□□□ 0.49
Cd47Q61735 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cd47Q61735 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd47Q61735 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd47Q61735 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd47Q61735 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd47Q61735 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.11■□□□□ 0.49
Cd47Q61735 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cd47Q61735 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd47Q61735 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.11■□□□□ 0.49
Cd47Q61735 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.1■□□□□ 0.49
Cd47Q61735 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Gm15820-201ENSMUST00000201566 728 ntBASIC18.1■□□□□ 0.49
Cd47Q61735 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.1■□□□□ 0.49
Cd47Q61735 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd47Q61735 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Cd47Q61735 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.09■□□□□ 0.49
Cd47Q61735 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.09■□□□□ 0.49
Cd47Q61735 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cd47Q61735 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd47Q61735 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cd47Q61735 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cd47Q61735 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.08■□□□□ 0.49
Cd47Q61735 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cd47Q61735 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cd47Q61735 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.08■□□□□ 0.48
Cd47Q61735 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.08■□□□□ 0.48
Cd47Q61735 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd47Q61735 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cd47Q61735 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cd47Q61735 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd47Q61735 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cd47Q61735 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd47Q61735 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Cd47Q61735 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.07■□□□□ 0.48
Cd47Q61735 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd47Q61735 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd47Q61735 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd47Q61735 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd47Q61735 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms