Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Gm43017-201ENSMUST00000198296 752 ntBASIC20.92■□□□□ 0.94
Smarcd1Q61466 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.92■□□□□ 0.94
Smarcd1Q61466 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd1Q61466 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smarcd1Q61466 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.91■□□□□ 0.94
Smarcd1Q61466 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Smarcd1Q61466 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.91■□□□□ 0.94
Smarcd1Q61466 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.91■□□□□ 0.94
Smarcd1Q61466 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcd1Q61466 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcd1Q61466 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd1Q61466 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd1Q61466 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd1Q61466 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.9■□□□□ 0.94
Smarcd1Q61466 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.9■□□□□ 0.94
Smarcd1Q61466 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Smarcd1Q61466 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd1Q61466 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.9■□□□□ 0.94
Smarcd1Q61466 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd1Q61466 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcd1Q61466 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcd1Q61466 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcd1Q61466 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.89■□□□□ 0.93
Smarcd1Q61466 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd1Q61466 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Smarcd1Q61466 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd1Q61466 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.87■□□□□ 0.93
Smarcd1Q61466 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd1Q61466 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd1Q61466 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd1Q61466 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd1Q61466 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.86■□□□□ 0.93
Smarcd1Q61466 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.85■□□□□ 0.93
Smarcd1Q61466 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Smarcd1Q61466 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms