Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm6139-201ENSMUST00000079261 882 ntBASIC18.8■□□□□ 0.6
Tnfaip3Q60769 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfaip3Q60769 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfaip3Q60769 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfaip3Q60769 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfaip3Q60769 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tnfaip3Q60769 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Mir6236-201ENSMUST00000184437 123 ntBASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfaip3Q60769 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfaip3Q60769 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Gm8493-201ENSMUST00000196881 489 ntBASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tnfaip3Q60769 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfaip3Q60769 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfaip3Q60769 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.59
Tnfaip3Q60769 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfaip3Q60769 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfaip3Q60769 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfaip3Q60769 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Serp2-204ENSMUST00000228055 705 ntBASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfaip3Q60769 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfaip3Q60769 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Spcs1-204ENSMUST00000226782 949 ntBASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfaip3Q60769 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Gm12251-201ENSMUST00000117893 792 ntBASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfaip3Q60769 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.71■□□□□ 0.59
Tnfaip3Q60769 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfaip3Q60769 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms