Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Satb1Q60611 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Satb1Q60611 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Satb1Q60611 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Satb1Q60611 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Satb1Q60611 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.66■□□□□ 0.9
Satb1Q60611 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Satb1Q60611 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Satb1Q60611 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.65■□□□□ 0.9
Satb1Q60611 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.65■□□□□ 0.9
Satb1Q60611 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Satb1Q60611 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Satb1Q60611 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Satb1Q60611 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Satb1Q60611 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Satb1Q60611 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Satb1Q60611 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Satb1Q60611 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Satb1Q60611 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Satb1Q60611 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.64■□□□□ 0.89
Satb1Q60611 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.64■□□□□ 0.89
Satb1Q60611 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Satb1Q60611 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Satb1Q60611 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Satb1Q60611 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Satb1Q60611 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.63■□□□□ 0.89
Satb1Q60611 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.62■□□□□ 0.89
Satb1Q60611 Gm12933-201ENSMUST00000120203 872 ntBASIC20.62■□□□□ 0.89
Satb1Q60611 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.62■□□□□ 0.89
Satb1Q60611 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.62■□□□□ 0.89
Satb1Q60611 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Satb1Q60611 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Satb1Q60611 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Satb1Q60611 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.62■□□□□ 0.89
Satb1Q60611 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Satb1Q60611 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.61■□□□□ 0.89
Satb1Q60611 Gm42778-201ENSMUST00000199644 553 ntBASIC20.61■□□□□ 0.89
Satb1Q60611 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.61■□□□□ 0.89
Satb1Q60611 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.61■□□□□ 0.89
Satb1Q60611 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.61■□□□□ 0.89
Satb1Q60611 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Satb1Q60611 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Satb1Q60611 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.61■□□□□ 0.89
Satb1Q60611 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Satb1Q60611 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Satb1Q60611 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.59■□□□□ 0.89
Satb1Q60611 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Satb1Q60611 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Satb1Q60611 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Satb1Q60611 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.58■□□□□ 0.89
Satb1Q60611 Gm10252-201ENSMUST00000209541 832 ntBASIC20.58■□□□□ 0.89
Satb1Q60611 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Satb1Q60611 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.57■□□□□ 0.88
Satb1Q60611 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Satb1Q60611 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.57■□□□□ 0.88
Satb1Q60611 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Satb1Q60611 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Satb1Q60611 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Satb1Q60611 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Satb1Q60611 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Satb1Q60611 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Satb1Q60611 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Satb1Q60611 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Satb1Q60611 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.56■□□□□ 0.88
Satb1Q60611 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.56■□□□□ 0.88
Satb1Q60611 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.56■□□□□ 0.88
Satb1Q60611 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.56■□□□□ 0.88
Satb1Q60611 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Satb1Q60611 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Satb1Q60611 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Satb1Q60611 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Satb1Q60611 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Satb1Q60611 Mir7071-201ENSMUST00000184847 69 ntBASIC20.55■□□□□ 0.88
Satb1Q60611 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Satb1Q60611 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Satb1Q60611 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.55■□□□□ 0.88
Satb1Q60611 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Satb1Q60611 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms