Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ubr3Q5U430 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.94■■□□□ 1.58
Ubr3Q5U430 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ubr3Q5U430 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.94■■□□□ 1.58
Ubr3Q5U430 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ubr3Q5U430 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC24.94■■□□□ 1.58
Ubr3Q5U430 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ubr3Q5U430 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ubr3Q5U430 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC24.94■■□□□ 1.58
Ubr3Q5U430 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ubr3Q5U430 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ubr3Q5U430 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ubr3Q5U430 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ubr3Q5U430 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ubr3Q5U430 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ubr3Q5U430 Gm12527-201ENSMUST00000117967 564 ntBASIC24.92■■□□□ 1.58
Ubr3Q5U430 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ubr3Q5U430 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ubr3Q5U430 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ubr3Q5U430 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ubr3Q5U430 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Ubr3Q5U430 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ubr3Q5U430 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Ubr3Q5U430 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ubr3Q5U430 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ubr3Q5U430 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ubr3Q5U430 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.89■■□□□ 1.58
Ubr3Q5U430 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ubr3Q5U430 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ubr3Q5U430 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
Ubr3Q5U430 Mir6236-201ENSMUST00000184437 123 ntBASIC24.89■■□□□ 1.57
Ubr3Q5U430 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Ubr3Q5U430 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ubr3Q5U430 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
Ubr3Q5U430 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ubr3Q5U430 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ubr3Q5U430 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ubr3Q5U430 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.87■■□□□ 1.57
Ubr3Q5U430 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Ubr3Q5U430 Gm10252-201ENSMUST00000209541 832 ntBASIC24.87■■□□□ 1.57
Ubr3Q5U430 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.87■■□□□ 1.57
Ubr3Q5U430 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ubr3Q5U430 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Ubr3Q5U430 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.86■■□□□ 1.57
Ubr3Q5U430 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ubr3Q5U430 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ubr3Q5U430 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ubr3Q5U430 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.86■■□□□ 1.57
Ubr3Q5U430 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Gm20760-201ENSMUST00000179197 648 ntBASIC24.85■■□□□ 1.57
Ubr3Q5U430 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC24.85■■□□□ 1.57
Ubr3Q5U430 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ubr3Q5U430 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.84■■□□□ 1.57
Ubr3Q5U430 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
Ubr3Q5U430 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ubr3Q5U430 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ubr3Q5U430 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.83■■□□□ 1.57
Ubr3Q5U430 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ubr3Q5U430 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ubr3Q5U430 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ubr3Q5U430 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ubr3Q5U430 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ubr3Q5U430 Gm13146-201ENSMUST00000118508 780 ntBASIC24.81■■□□□ 1.56
Ubr3Q5U430 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ubr3Q5U430 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ubr3Q5U430 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ubr3Q5U430 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ubr3Q5U430 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ubr3Q5U430 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ubr3Q5U430 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.8■■□□□ 1.56
Ubr3Q5U430 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.8■■□□□ 1.56
Ubr3Q5U430 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ubr3Q5U430 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ubr3Q5U430 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ubr3Q5U430 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ubr3Q5U430 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ubr3Q5U430 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ubr3Q5U430 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.79■■□□□ 1.56
Ubr3Q5U430 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ubr3Q5U430 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC24.79■■□□□ 1.56
Ubr3Q5U430 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Ubr3Q5U430 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ubr3Q5U430 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms