Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Gm10399-202ENSMUST00000202768 748 ntBASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vmn1r223Q5SSA0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vmn1r223Q5SSA0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Rps24-207ENSMUST00000224568 714 ntBASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.39■□□□□ 0.37
Vmn1r223Q5SSA0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vmn1r223Q5SSA0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vmn1r223Q5SSA0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vmn1r223Q5SSA0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r223Q5SSA0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r223Q5SSA0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r223Q5SSA0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms