Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-4Q5R1I0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.85■□□□□ 0.29
Trav6d-4Q5R1I0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Gm12251-201ENSMUST00000117893 792 ntBASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Spcs1-204ENSMUST00000226782 949 ntBASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-4Q5R1I0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-4Q5R1I0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Gm43017-201ENSMUST00000198296 752 ntBASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav6d-4Q5R1I0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-4Q5R1I0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-4Q5R1I0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav6d-4Q5R1I0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav6d-4Q5R1I0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-4Q5R1I0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Gm43173-201ENSMUST00000202246 593 ntBASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-4Q5R1I0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-4Q5R1I0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6d-4Q5R1I0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms