Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7d-4Q5R1H9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7d-4Q5R1H9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav7d-4Q5R1H9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav7d-4Q5R1H9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7d-4Q5R1H9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7d-4Q5R1H9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7d-4Q5R1H9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7d-4Q5R1H9 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7d-4Q5R1H9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7d-4Q5R1H9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms