Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC35.06■■■■□ 3.2
Trim41Q5NCC3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC35.06■■■■□ 3.2
Trim41Q5NCC3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC35.06■■■■□ 3.2
Trim41Q5NCC3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Trim41Q5NCC3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Trim41Q5NCC3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC35.05■■■■□ 3.2
Trim41Q5NCC3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
Trim41Q5NCC3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Trim41Q5NCC3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Trim41Q5NCC3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Trim41Q5NCC3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC35.03■■■■□ 3.2
Trim41Q5NCC3 Gm40848-201ENSMUST00000221998 324 ntBASIC35.03■■■■□ 3.2
Trim41Q5NCC3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC35.03■■■■□ 3.2
Trim41Q5NCC3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Trim41Q5NCC3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC35.03■■■■□ 3.2
Trim41Q5NCC3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Trim41Q5NCC3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Trim41Q5NCC3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC35.01■■■■□ 3.2
Trim41Q5NCC3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Trim41Q5NCC3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
Trim41Q5NCC3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC35.01■■■■□ 3.19
Trim41Q5NCC3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
Trim41Q5NCC3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC35■■■■□ 3.19
Trim41Q5NCC3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC35■■■■□ 3.19
Trim41Q5NCC3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC35■■■■□ 3.19
Trim41Q5NCC3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
Trim41Q5NCC3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC35■■■■□ 3.19
Trim41Q5NCC3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC35■■■■□ 3.19
Trim41Q5NCC3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
Trim41Q5NCC3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC34.99■■■■□ 3.19
Trim41Q5NCC3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC34.99■■■■□ 3.19
Trim41Q5NCC3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC34.99■■■■□ 3.19
Trim41Q5NCC3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC34.99■■■■□ 3.19
Trim41Q5NCC3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Trim41Q5NCC3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
Trim41Q5NCC3 Gm12933-201ENSMUST00000120203 872 ntBASIC34.98■■■■□ 3.19
Trim41Q5NCC3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Trim41Q5NCC3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Trim41Q5NCC3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Trim41Q5NCC3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC34.97■■■■□ 3.19
Trim41Q5NCC3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC34.97■■■■□ 3.19
Trim41Q5NCC3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim41Q5NCC3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Trim41Q5NCC3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Trim41Q5NCC3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC34.95■■■■□ 3.19
Trim41Q5NCC3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC34.95■■■■□ 3.19
Trim41Q5NCC3 Gm26766-202ENSMUST00000227544 2347 ntBASIC34.94■■■■□ 3.18
Trim41Q5NCC3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC34.94■■■■□ 3.18
Trim41Q5NCC3 Mir6236-201ENSMUST00000184437 123 ntBASIC34.94■■■■□ 3.18
Trim41Q5NCC3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Trim41Q5NCC3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC34.93■■■■□ 3.18
Trim41Q5NCC3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC34.92■■■■□ 3.18
Trim41Q5NCC3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Trim41Q5NCC3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Gm12441-201ENSMUST00000121806 588 ntBASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Mir6982-201ENSMUST00000184354 68 ntBASIC34.91■■■■□ 3.18
Trim41Q5NCC3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Trim41Q5NCC3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Trim41Q5NCC3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Trim41Q5NCC3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Trim41Q5NCC3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Trim41Q5NCC3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms