Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn2bQ56A07 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2bQ56A07 Gm9959-201ENSMUST00000068277 390 ntBASIC19.82■□□□□ 0.76
Scn2bQ56A07 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.82■□□□□ 0.76
Scn2bQ56A07 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.81■□□□□ 0.76
Scn2bQ56A07 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.81■□□□□ 0.76
Scn2bQ56A07 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Scn2bQ56A07 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.8■□□□□ 0.76
Scn2bQ56A07 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.8■□□□□ 0.76
Scn2bQ56A07 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn2bQ56A07 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Gm45102-201ENSMUST00000207427 857 ntBASIC19.79■□□□□ 0.76
Scn2bQ56A07 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn2bQ56A07 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.79■□□□□ 0.76
Scn2bQ56A07 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2bQ56A07 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Gm14117-201ENSMUST00000122417 843 ntBASIC19.78■□□□□ 0.76
Scn2bQ56A07 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scn2bQ56A07 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Gm7417-201ENSMUST00000192950 473 ntBASIC19.78■□□□□ 0.76
Scn2bQ56A07 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.78■□□□□ 0.76
Scn2bQ56A07 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2bQ56A07 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn2bQ56A07 Gm40881-201ENSMUST00000223397 166 ntBASIC19.77■□□□□ 0.76
Scn2bQ56A07 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Scn2bQ56A07 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scn2bQ56A07 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scn2bQ56A07 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2bQ56A07 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2bQ56A07 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2bQ56A07 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn2bQ56A07 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2bQ56A07 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2bQ56A07 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2bQ56A07 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms