Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rc3h1Q4VGL6 Gm26833-201ENSMUST00000180899 440 ntBASIC23.28■■□□□ 1.32
Rc3h1Q4VGL6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rc3h1Q4VGL6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rc3h1Q4VGL6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rc3h1Q4VGL6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Gm18284-201ENSMUST00000172604 624 ntBASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rc3h1Q4VGL6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Smad6-203ENSMUST00000179458 273 ntBASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Gm40848-201ENSMUST00000221998 324 ntBASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rc3h1Q4VGL6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rc3h1Q4VGL6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rc3h1Q4VGL6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h1Q4VGL6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rc3h1Q4VGL6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rc3h1Q4VGL6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rc3h1Q4VGL6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rc3h1Q4VGL6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rc3h1Q4VGL6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rc3h1Q4VGL6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rc3h1Q4VGL6 Gm8495-201ENSMUST00000188740 694 ntBASIC23.22■■□□□ 1.31
Rc3h1Q4VGL6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h1Q4VGL6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h1Q4VGL6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h1Q4VGL6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h1Q4VGL6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rc3h1Q4VGL6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Rc3h1Q4VGL6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
Rc3h1Q4VGL6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.2■■□□□ 1.3
Rc3h1Q4VGL6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rc3h1Q4VGL6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rc3h1Q4VGL6 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.2■■□□□ 1.3
Rc3h1Q4VGL6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Gm43060-201ENSMUST00000200621 289 ntBASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rc3h1Q4VGL6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rc3h1Q4VGL6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rc3h1Q4VGL6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.18■■□□□ 1.3
Rc3h1Q4VGL6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rc3h1Q4VGL6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rc3h1Q4VGL6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rc3h1Q4VGL6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rc3h1Q4VGL6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rc3h1Q4VGL6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Rc3h1Q4VGL6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rc3h1Q4VGL6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rc3h1Q4VGL6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms