Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm37055-201ENSMUST00000191866 133 ntBASIC12.3□□□□□ -0.44
Herc2Q4U2R1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Herc2Q4U2R1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Herc2Q4U2R1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.3□□□□□ -0.44
Herc2Q4U2R1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Herc2Q4U2R1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Herc2Q4U2R1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Gm6420-201ENSMUST00000193885 723 ntBASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Gm5643-201ENSMUST00000117081 966 ntBASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Gm43799-201ENSMUST00000201845 579 ntBASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc2Q4U2R1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.27□□□□□ -0.44
Herc2Q4U2R1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Herc2Q4U2R1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.27□□□□□ -0.45
Herc2Q4U2R1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Herc2Q4U2R1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Herc2Q4U2R1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.27□□□□□ -0.45
Herc2Q4U2R1 Gm7367-201ENSMUST00000057611 492 ntBASIC12.27□□□□□ -0.45
Herc2Q4U2R1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Herc2Q4U2R1 Gm6206-201ENSMUST00000133472 2199 ntBASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Herc2Q4U2R1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.25□□□□□ -0.45
Herc2Q4U2R1 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Herc2Q4U2R1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Herc2Q4U2R1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms