Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC30.03■■■□□ 2.4
Arhgef40Q3UPH7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Arhgef40Q3UPH7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Arhgef40Q3UPH7 Gm26766-202ENSMUST00000227544 2347 ntBASIC30.03■■■□□ 2.4
Arhgef40Q3UPH7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Arhgef40Q3UPH7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC30.02■■■□□ 2.4
Arhgef40Q3UPH7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Arhgef40Q3UPH7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Arhgef40Q3UPH7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Arhgef40Q3UPH7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Arhgef40Q3UPH7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Arhgef40Q3UPH7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Arhgef40Q3UPH7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Arhgef40Q3UPH7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Arhgef40Q3UPH7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC30.01■■■□□ 2.39
Arhgef40Q3UPH7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Arhgef40Q3UPH7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Arhgef40Q3UPH7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC30■■■□□ 2.39
Arhgef40Q3UPH7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC30■■■□□ 2.39
Arhgef40Q3UPH7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Arhgef40Q3UPH7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC29.99■■■□□ 2.39
Arhgef40Q3UPH7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Arhgef40Q3UPH7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Arhgef40Q3UPH7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Arhgef40Q3UPH7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Arhgef40Q3UPH7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Arhgef40Q3UPH7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Arhgef40Q3UPH7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Arhgef40Q3UPH7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Arhgef40Q3UPH7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Arhgef40Q3UPH7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC29.95■■■□□ 2.39
Arhgef40Q3UPH7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC29.95■■■□□ 2.38
Arhgef40Q3UPH7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC29.95■■■□□ 2.38
Arhgef40Q3UPH7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC29.95■■■□□ 2.38
Arhgef40Q3UPH7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Arhgef40Q3UPH7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.38
Arhgef40Q3UPH7 Reep4-203ENSMUST00000226563 1444 ntBASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
Arhgef40Q3UPH7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Arhgef40Q3UPH7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Arhgef40Q3UPH7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Gm27801-201ENSMUST00000184174 223 ntBASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Gm12933-201ENSMUST00000120203 872 ntBASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC29.91■■■□□ 2.38
Arhgef40Q3UPH7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Arhgef40Q3UPH7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC29.9■■■□□ 2.38
Arhgef40Q3UPH7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC29.9■■■□□ 2.38
Arhgef40Q3UPH7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Arhgef40Q3UPH7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC29.89■■■□□ 2.38
Arhgef40Q3UPH7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
Arhgef40Q3UPH7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Arhgef40Q3UPH7 Gm13234-201ENSMUST00000120010 747 ntBASIC29.88■■■□□ 2.37
Arhgef40Q3UPH7 Gm42778-201ENSMUST00000199644 553 ntBASIC29.88■■■□□ 2.37
Arhgef40Q3UPH7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC29.88■■■□□ 2.37
Arhgef40Q3UPH7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC29.88■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms