Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.85■□□□□ 0.61
Spg11Q3UHA3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Spg11Q3UHA3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.83■□□□□ 0.61
Spg11Q3UHA3 Gm9987-201ENSMUST00000069768 567 ntBASIC18.83■□□□□ 0.61
Spg11Q3UHA3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Spg11Q3UHA3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.83■□□□□ 0.6
Spg11Q3UHA3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Spg11Q3UHA3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Spg11Q3UHA3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Gm37055-201ENSMUST00000191866 133 ntBASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Spg11Q3UHA3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Spg11Q3UHA3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Spg11Q3UHA3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.79■□□□□ 0.6
Spg11Q3UHA3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Gm21362-201ENSMUST00000194272 928 ntBASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Spg11Q3UHA3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Spg11Q3UHA3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Spg11Q3UHA3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Spg11Q3UHA3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Spg11Q3UHA3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Spg11Q3UHA3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Spg11Q3UHA3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Spg11Q3UHA3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms