Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cln6Q3U466 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cln6Q3U466 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cln6Q3U466 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Cln6Q3U466 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cln6Q3U466 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.99■□□□□ 0.31
Cln6Q3U466 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cln6Q3U466 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.99■□□□□ 0.31
Cln6Q3U466 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cln6Q3U466 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cln6Q3U466 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cln6Q3U466 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cln6Q3U466 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cln6Q3U466 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cln6Q3U466 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cln6Q3U466 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.98■□□□□ 0.31
Cln6Q3U466 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cln6Q3U466 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cln6Q3U466 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cln6Q3U466 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cln6Q3U466 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cln6Q3U466 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cln6Q3U466 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.97■□□□□ 0.31
Cln6Q3U466 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cln6Q3U466 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cln6Q3U466 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cln6Q3U466 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cln6Q3U466 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cln6Q3U466 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cln6Q3U466 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Golph3-202ENSMUST00000226517 2359 ntBASIC16.96■□□□□ 0.31
Cln6Q3U466 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cln6Q3U466 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cln6Q3U466 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cln6Q3U466 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.96■□□□□ 0.31
Cln6Q3U466 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.96■□□□□ 0.31
Cln6Q3U466 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.96■□□□□ 0.31
Cln6Q3U466 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cln6Q3U466 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cln6Q3U466 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.95■□□□□ 0.3
Cln6Q3U466 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Cln6Q3U466 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cln6Q3U466 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cln6Q3U466 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cln6Q3U466 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cln6Q3U466 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.94■□□□□ 0.3
Cln6Q3U466 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.94■□□□□ 0.3
Cln6Q3U466 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cln6Q3U466 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.94■□□□□ 0.3
Cln6Q3U466 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cln6Q3U466 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cln6Q3U466 Gm45444-201ENSMUST00000211394 898 ntBASIC16.93■□□□□ 0.3
Cln6Q3U466 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.93■□□□□ 0.3
Cln6Q3U466 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms