Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shcbp1lQ3TTP0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.12■□□□□ 0.81
Shcbp1lQ3TTP0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shcbp1lQ3TTP0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Shcbp1lQ3TTP0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shcbp1lQ3TTP0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.12■□□□□ 0.81
Shcbp1lQ3TTP0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Spcs1-204ENSMUST00000226782 949 ntBASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shcbp1lQ3TTP0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Shcbp1lQ3TTP0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Gm43173-201ENSMUST00000202246 593 ntBASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shcbp1lQ3TTP0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Shcbp1lQ3TTP0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Shcbp1lQ3TTP0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shcbp1lQ3TTP0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Shcbp1lQ3TTP0 Gm12251-201ENSMUST00000117893 792 ntBASIC20.08■□□□□ 0.81
Shcbp1lQ3TTP0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shcbp1lQ3TTP0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shcbp1lQ3TTP0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shcbp1lQ3TTP0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shcbp1lQ3TTP0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shcbp1lQ3TTP0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shcbp1lQ3TTP0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shcbp1lQ3TTP0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms