Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fndc4Q3TR08 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fndc4Q3TR08 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fndc4Q3TR08 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fndc4Q3TR08 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fndc4Q3TR08 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.95■□□□□ 0.3
Fndc4Q3TR08 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Fndc4Q3TR08 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Fndc4Q3TR08 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.93■□□□□ 0.3
Fndc4Q3TR08 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Fndc4Q3TR08 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Fndc4Q3TR08 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.93■□□□□ 0.3
Fndc4Q3TR08 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Fndc4Q3TR08 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Fndc4Q3TR08 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fndc4Q3TR08 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Fndc4Q3TR08 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Fndc4Q3TR08 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Gm15546-201ENSMUST00000122095 826 ntBASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fndc4Q3TR08 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Fndc4Q3TR08 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fndc4Q3TR08 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms